PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000575G0620
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 170aa    MW: 19011.7 Da    PI: 9.2395
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000575G0620genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.81.2e-133691358
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
                     +lkr rr+++NR +A+ sR+RK++ ++ L+  v +L+ eN++L+ +l+   + +a+
  PH01000575G0620 36 DLKRKRRMESNRRSAKVSRLRKQKHLDDLTSQVNQLTRENQQLITTLNITVQSYAA 91
                     69******************************************998866666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-103180No hitNo description
SMARTSM003384.8E-133498IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.0133678IPR004827Basic-leucine zipper domain
PfamPF001701.0E-113783IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.87E-113889No hitNo description
CDDcd147023.17E-153990No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MTLSGGTPPS GTSSGSSHGT RSSGSEADME LQARMDLKRK RRMESNRRSA KVSRLRKQKH  60
LDDLTSQVNQ LTRENQQLIT TLNITVQSYA AAEAQNSVMR TQLMELESRL CALREIICIM  120
NSNKFANATT TTYPSTMMTA TTPNYDLLGE IAWIPGMQMM QQPIDLLYQC
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000575G0620
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0956880.0FP095688.1 Phyllostachys edulis cDNA clone: bphyem205h23, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025822603.13e-75bZIP transcription factor 44-like isoform X1
TrEMBLA0A2S3I2097e-74A0A2S3I209_9POAL; Uncharacterized protein
STRINGSb07g015450.11e-71(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37403276
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.13e-25basic leucine-zipper 44