PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000621G0810
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 171aa    MW: 18449.1 Da    PI: 9.6555
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000621G0810genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.31.1e-1093155163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      eke kr rr   NRe+Ar   +R++   +eL++kv+ L+++N+ +kke ++  +e+ +lk  +
  PH01000621G0810  93 EKEAKRLRRVLANRESARQTILRRQVIRDELARKVADLSSQNEHMKKEKDMVMQEYLSLKETN 155
                      89**********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-591158No hitNo description
SMARTSM003384.3E-1293157IPR004827Basic-leucine zipper domain
PfamPF001708.3E-993155IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.81895158IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.55E-797153No hitNo description
CDDcd147021.17E-1098148No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MALAAMAGAG PGAPAAVQMP PVQHTTAQAT AAEHEDEELA STRLSLELGK VGIRSSCCSG  60
SSSPGHPAQQ AVQVAAAAPG YGPRPRHMLT EAEKEAKRLR RVLANRESAR QTILRRQVIR  120
DELARKVADL SSQNEHMKKE KDMVMQEYLS LKETNKQLKE QAHHLSLSLL *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000621G0810
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025809461.16e-63light-inducible protein CPRF2-like
TrEMBLB8BJ598e-66B8BJ59_ORYSI; Uncharacterized protein
STRINGPavir.Cb02058.1.p2e-66(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.12e-18bZIP family protein