PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000754G0440
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family TALE
Protein Properties Length: 612aa    MW: 63858 Da    PI: 5.708
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000754G0440genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.33e-093343662254
                      SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
         Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                      +ryp+ +++  LAk++gLt +qV++WF N R +
  PH01000754G0440 334 CRYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 366
                      89*****************************88 PP
2BELL115.82.1e-37233303171
             BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 
                      erqelq+kk kL+++l+eV++rY+qy++q+q+v+ssFea ag gsa+ Yt+lAl++iSr+FrcL+daia q
  PH01000754G0440 233 ERQELQMKKGKLINMLDEVEQRYRQYHQQMQVVVSSFEALAGGGSARTYTALALRTISRQFRCLRDAIAAQ 303
                      79******************************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.1E-58159302IPR006563POX domain
PfamPF075268.9E-50164301IPR006563POX domain
SMARTSM003891.6E-4290374IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.605.7E-18334376IPR009057Homeodomain-like
CDDcd000862.42E-10334371No hitNo description
SuperFamilySSF466893.76E-12334376IPR009057Homeodomain-like
PROSITE profilePS5007110.722335370IPR001356Homeobox domain
PfamPF059209.5E-13336366IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 612 aa     Download sequence    Send to blast
MAAYYHGGAG MDIQSGTDGL QTLYLMNPSY AGYTDAAGAA PVAANMMLLN SAVNSMTPAS  60
FGHQASPSSA QHFVGIPLQA SPSSSQRFVG IPLQAPPSGY NLWTPATTGA GDMSPPPQAP  120
GTAGVSAVLS LSSRETPPVT VAAVAGDEGK YLGTSVTTTS QGQMVMSSKY LRAAQELLDE  180
VVSVSKGVED AKAAAKSVAS VKKKEDSEGV SSGGTEDGGG AKSSGAAEMS TAERQELQMK  240
KGKLINMLDE VEQRYRQYHQ QMQVVVSSFE ALAGGGSART YTALALRTIS RQFRCLRDAI  300
AAQQLPLYVH TQTGAHSSPR VGISLVAVDP VLSCRYPKDS DKIMLAKQTG LTRSQVSNWF  360
INARVRLWKP MVEEMYLEET KDQDAAGDEG KSGGSKRNNT TDVDGVDPPK PDCNAMSRAA  420
KSGSKDVVVH ASLLELAGDN QAGFYDDDDD DSSATALQHK LKKARTDDQS AFHVSDVVTT  480
LHAQAAAAAR QHDEVSHREL LMKFMESGGG GAAPDARDHQ DGAGGYSLFE PSPYGQFGSE  540
PFAFAGHGGV SLTLGLPHGA GAGAGEQTAS FLMSSSNASD SGSHGVAAAG YDMNMQSTKS  600
FAAQLMRDFV A*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000754G0440
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025827941.10.0BEL1-like homeodomain protein 1
RefseqXP_025827942.10.0BEL1-like homeodomain protein 1
RefseqXP_025827943.10.0BEL1-like homeodomain protein 1
RefseqXP_025827944.10.0BEL1-like homeodomain protein 1
TrEMBLA0A1E5WEK50.0A0A1E5WEK5_9POAL; BEL1-like homeodomain protein 1
STRINGSi026085m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48163758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.33e-59BEL1-like homeodomain 1