PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000770G0540
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family EIL
Protein Properties Length: 613aa    MW: 68296.6 Da    PI: 6.5174
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000770G0540genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3429.53.2e-131384181353
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      eel +rmwkd+++l+r+ker+ +l   ++a++++++ + +++qa rkkmsraQDgiLkYMlk mevcna+GfvYgiip+kgkpv+gasd++raW
  PH01000770G0540  38 EELARRMWKDRVRLRRIKERQHKLP-LQQAELEKSRPKPISDQALRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPDKGKPVSGASDNMRAW 130
                      8********************9865.66667*************************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--T CS
             EIN3  95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglsk 188
                      Wkekv+fd+ngp+ai+ky+a+nl++++++s+   + +++hsl++lqD+tlgSLLs+lmqhc+ppqr++ple+++ pPWWP+G+e+ww +lgl++
  PH01000770G0540 131 WKEKVKFDKNGPVAIAKYEADNLMAANAQSS---GVKNQHSLMDLQDATLGSLLSSLMQHCNPPQRKYPLETATHPPWWPSGNEEWWIALGLPR 221
                      **************************88888...89********************************************************** PP

                      T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX....XXXXXXXXXXXX CS
             EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss....slrkqspkvtls 277
                       q  ppykkphdlkk+wkv+vLt vikhmsp++++ir+++r+sk+lqdkm+akes ++l vl++ee++++++    s+    s  ++++  t+s
  PH01000770G0540 222 GQI-PPYKKPHDLKKVWKVGVLTGVIKHMSPNFDKIRNHVRKSKCLQDKMTAKESLIWLGVLQREERLVHSIDNGvSEithhSAPEDRNGDTHS 314
                      **9.9****************************************************************9999996446655555689999*** PP

                      XXXXXXXXXXXXXX.XXXXXXXXXX.................................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.X CS
             EIN3 278 ceqkedvegkkeskikhvqavktta.................................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgse 338
                      +++++dv+g +e   +++++++++                                  g++ + krk+ +++s+ ++   v    q+ +  +++
  PH01000770G0540 315 SSNEYDVDGFEEAPLSTSSKDDEQGlspvaqsseeyaprrgkerantkrrnqvvpikaGAKKTPKRKRARRSSTVIEHD-V----QRTEDARES 403
                      ********99999989999988877999**************************9999999999999777777776544.4....555556677 PP

                      XXXXXXXXXXXXXXX CS
             EIN3 339 telifadknsisqne 353
                      +++ ++d+n+++q e
  PH01000770G0540 404 SRNLIPDMNRLDQVE 418
                      899999999998865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048737.0E-12438286No hitNo description
Gene3DG3DSA:1.10.3180.102.0E-68160293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.75E-59166289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 613 aa     Download sequence    Send to blast
MEHLAILATE LGDSSDFEVD GIQNLTENDV SDEEIEPEEL ARRMWKDRVR LRRIKERQHK  60
LPLQQAELEK SRPKPISDQA LRKKMSRAQD GILKYMLKLM EVCNARGFVY GIIPDKGKPV  120
SGASDNMRAW WKEKVKFDKN GPVAIAKYEA DNLMAANAQS SGVKNQHSLM DLQDATLGSL  180
LSSLMQHCNP PQRKYPLETA THPPWWPSGN EEWWIALGLP RGQIPPYKKP HDLKKVWKVG  240
VLTGVIKHMS PNFDKIRNHV RKSKCLQDKM TAKESLIWLG VLQREERLVH SIDNGVSEIT  300
HHSAPEDRNG DTHSSSNEYD VDGFEEAPLS TSSKDDEQGL SPVAQSSEEY APRRGKERAN  360
TKRRNQVVPI KAGAKKTPKR KRARRSSTVI EHDVQRTEDA RESSRNLIPD MNRLDQVEIP  420
GMANQITSFC QGGNASEALQ HRGDAQGQVH LPGAGVNNFD SAQAVNATPV SIYMGGQPAP  480
YQNSDNARSE SGNTFPLDAD SGFNNFPSSY QTLPLKQSLP LSMMDHHVVP MGIRAPADNS  540
SYGDHVIGSG NSASVPGDMQ QLIDYHFYSE QDKFVGSSFV GLPLDYISIS SPIPDIDDLL  600
LHDDDLMEYL GT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A1e-631662909133ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1361381KRRNQVVPIKAGAKKTPKRKR
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000770G0540
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006660770.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_015696822.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-142EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A0A9DKK80.0A0A0A9DKK8_ARUDO; Uncharacterized protein
STRINGOB09G21280.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-144ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]