PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01001003G0160
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family ERF
Protein Properties Length: 230aa    MW: 23841.1 Da    PI: 4.7748
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01001003G0160genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.4e-183786255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                     +ykGVr ++ +g+Wv+eIr p     +  +r++lg++ t+e Aa+a++aa ++l+g
  PH01001003G0160 37 QYKGVRMRS-WGSWVSEIRAP-----HqkRRIWLGSYATPEAAARAYDAALLCLKG 86
                     6*****998.**********7.....335************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.4E-293696IPR001471AP2/ERF domain
CDDcd000181.89E-193794No hitNo description
PfamPF008473.9E-113786IPR001471AP2/ERF domain
PROSITE profilePS5103222.1023794IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-203795IPR016177DNA-binding domain
SMARTSM003802.7E-3537100IPR001471AP2/ERF domain
PRINTSPR003675.0E-83849IPR001471AP2/ERF domain
PRINTSPR003675.0E-86076IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MVKNPSKTEH GGGGGGAASN AAESCSGSGS KQTVVRQYKG VRMRSWGSWV SEIRAPHQKR  60
RIWLGSYATP EAAARAYDAA LLCLKGSDAV LNFPSSSSSS SHPVDNRHSD SAAPPDMSPR  120
SIQRVAAAAA AAFDSGIVDD SCSSSAEATT PTSASLSTLG SADVQEHATS SSAAANASSL  180
PEGEELWTEL DAFASPKFMD FIAAGATPFS SSWEEPEEDG ELMRLWSFC*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01001003G0160
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189509.11e-85ethylene-responsive transcription factor ERF014-like
TrEMBLA0A3B6HPM91e-88A0A3B6HPM9_WHEAT; Uncharacterized protein
TrEMBLA0A446QRC61e-88A0A446QRC6_TRITD; Uncharacterized protein
STRINGTraes_4AS_18663793B.12e-89(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108303040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.14e-25ERF family protein