PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01001184G0290
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family EIL
Protein Properties Length: 734aa    MW: 78757.7 Da    PI: 5.1521
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01001184G0290genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3493.31.3e-150644521354
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      eel++rmw+d+m++krlke ++++ +++e    a+++++s+eqarrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipekgkpv+gasd+LraW
  PH01001184G0290  64 EELERRMWRDRMRHKRLKELQQSRGGEREGGDAAARQRQSQEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRAW 157
                      8*****************************989999********************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT CS
             EIN3  95 Wkekvefdrngpaaiskyqaknlilsgessl.qt..ersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg 185
                      Wkekv+fdrngpaai+kyqa+n+ ++ge +   +  ++s+ ++sl+elqDTtlgSLLsalmqhcdppqrr+plekgv+pPWWP G+e+ww+e+g
  PH01001184G0290 158 WKEKVRFDRNGPAAIAKYQADNATPGGEGEVgGAggAASAGPQSLHELQDTTLGSLLSALMQHCDPPQRRYPLEKGVPPPWWPDGTEEWWPEAG 251
                      **************************998874223378999***************************************************** PP

                      --TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XXXXXXXXXXXXX CS
             EIN3 186 lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ssslrkqspkvtl 276
                      ++k+ g+ppykkphdlkkawkv+vLtavikhmsp++e++r+l+rqsk+lqdkm+a+e  ++l+vl+qee+++ ++++    ++ +  ++ ++++
  PH01001184G0290 252 VPKELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVEKVRRLVRQSKCLQDKMTAREIVTWLAVLKQEEELYLKLHPGacrPPPSAAGALSFNA 345
                      *****************************************************************************98654566778888888 PP

                      XXXXXXXXXXXXXXX.XXXXXXXXXX............................XXXXXXXXXXXXXX.XXXX.XXX......XXXXXXX.XXX CS
             EIN3 277 sceqkedvegkkeskikhvqavktta............................gfpvvrkrkkkpse.sakv.sskevsrtcqssqfrgsete 340
                      s++ ++dv+g + ++  + +a +++a                            ++++++kr ++p+  ++ + +++  ++tc++ q+++s+++
  PH01001184G0290 346 SSG-EYDVDGVDGEEAGNLKAPSEAAafvdltmdaamsnkflimpaalmkeeatDVEFTQKRSAPPAAePELMlNNNARVYTCDNVQCPHSDYA 438
                      887.99***666666566666655557889*********************************98865145551455779************** PP

                      XXXXXXXXXXXXXX CS
             EIN3 341 lifadknsisqney 354
                      l+f ++n+++ ++y
  PH01001184G0290 439 LGFLNRNARNAHQY 452
                      ************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.8E-12864320No hitNo description
Gene3DG3DSA:1.10.3180.101.9E-70198329IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167686.93E-58201323IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 734 aa     Download sequence    Send to blast
MMGGGVMMDR RMAFAAEGKG DKDLMGFGGE CFVGEGDLVN PAPAHQVHEG FPEDESDDDV  60
ADIEELERRM WRDRMRHKRL KELQQSRGGE REGGDAAARQ RQSQEQARRK KMSRAQDGIL  120
KYMLKMMEVC NAQGFVYGII PEKGKPVSGA SDNLRAWWKE KVRFDRNGPA AIAKYQADNA  180
TPGGEGEVGG AGGAASAGPQ SLHELQDTTL GSLLSALMQH CDPPQRRYPL EKGVPPPWWP  240
DGTEEWWPEA GVPKELGPPP YKKPHDLKKA WKVAVLTAVI KHMSPDVEKV RRLVRQSKCL  300
QDKMTAREIV TWLAVLKQEE ELYLKLHPGA CRPPPSAAGA LSFNASSGEY DVDGVDGEEA  360
GNLKAPSEAA AFVDLTMDAA MSNKFLIMPA ALMKEEATDV EFTQKRSAPP AAEPELMLNN  420
NARVYTCDNV QCPHSDYALG FLNRNARNAH QYSCKYNSPA IQPSDAESKP PPIFPPSYTP  480
PSQALGGFHF GLPVDGQRCL AGLMNMYETD VAAHSNLSTD TLLVPCLLGG VNNVQQQQQQ  540
SAAFFIRDDE PLGGDTTVAA PDHEYRLSSG FNVSAGGTLD YAGAMQEPQQ NRRERCKKSL  600
RSSVVWYGKI WCAGVVWSGV AGSGVVCFNA SREAWKIGGE DCLGGGFGGY TNGGIGGGLE  660
GGVDVGIGSE VLDGGNELGD GDDEAGASGN LVVAPVEVMV MALVSCSGVG VSAGLSVAGD  720
IQKRIKTGVR CNG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-681973281132Protein ETHYLENE INSENSITIVE 3
4zds_B5e-681973281132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512, PubMed:25995326). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Required for ethylene-promoted coleoptile elongation (PubMed:25995326). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:25995326}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01001184G0290
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding and metyhl jasmonate. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020153937.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ8W3L90.0EIL2_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 2
TrEMBLA0A0E0LPX80.0A0A0E0LPX8_ORYPU; Uncharacterized protein
STRINGOPUNC07G25150.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-138ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]
  3. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]