PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01001480G0160
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 382aa    MW: 41119.3 Da    PI: 8.8237
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01001480G0160genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.41e-10230288563
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      kr +r   NR++A +s +RK  ++ eLe+kv+ L+ e ++L  ++ + +  +a l++++
  PH01001480G0160 230 KRVKRILNNRVSAAKSKERKVRYMSELERKVQLLQMEATTLSAQVTMVQRDYAGLTTQN 288
                      899********************************************999999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-15226290IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.496228291IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-11230285No hitNo description
PfamPF001701.1E-8230288IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.4E-11230287No hitNo description
CDDcd147035.93E-20231282No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MNSLAPHPCA DLAAPAAIPL SPPPLSSSFD RAPSGLPPLR AGHRRSQSDI FLGFSKPNLH  60
MPPPAPVKRE AAAAEGCKSV DNTTLDGLVG SYMNSKGLGV IGSSGDGTQE RRDHLDSQVC  120
DPRARSPADS SENEAGSVGG SMPRHCRSLS VDSFIGKFNF GAAGQESSNL PLPSPGAGGA  180
CCLSRSGSRS IGGAAALIAT EFANGEFSET DKKKIIANER LTEIVLTDPK RVKRILNNRV  240
SAAKSKERKV RYMSELERKV QLLQMEATTL SAQVTMVQRD YAGLTTQNKE MKILLQAMEQ  300
QAQLRDALNE ALSAEVQRLK LAAGEISDPR MPNGSHQRMS SQMLQLQQPQ IQNQPSQTQQ  360
SQQQQPQQSA WLEAPQQQWN F*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01001480G0160
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003576738.11e-124transcription factor RF2a
TrEMBLA0A3B6LQG61e-130A0A3B6LQG6_WHEAT; Uncharacterized protein
STRINGMLOC_51623.11e-125(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62473650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-64bZIP family protein