PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01001500G0110
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family WRKY
Protein Properties Length: 1169aa    MW: 131060 Da    PI: 7.2976
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01001500G0110genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.53.7e-25926987159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDg++WrKYGqKe+ g+++pr+Y+rCt++   gC+++k+ +r+++dp +++++Y g+H++ 
  PH01001500G0110 926 LDDGFSWRKYGQKEILGAKYPRGYFRCTHRhtqGCHATKQAQRTDDDPLLFDVVYIGTHTCA 987
                      59***************************98999**************************96 PP
2WRKY79.92.8e-2510551116159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY    1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59  
                       ldDg++WrK+GqK+  g+++pr+YYrCt++   gCp++k+v+r+++dp +++++Y+g+H++ 
  PH01001500G0110 1055 LDDGFSWRKFGQKDTFGAKHPRGYYRCTHKysrGCPATKQVQRTDDDPPLFDVVYHGTHTCA 1116
                       59***************************9999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147983.90E-1342161No hitNo description
PfamPF009313.1E-23237350IPR002182NB-ARC
SuperFamilySSF525404.25E-13239324IPR027417P-loop containing nucleoside triphosphate hydrolase
SuperFamilySSF520585.1E-26389786IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.104.5E-17461713IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:2.20.25.803.0E-26913988IPR003657WRKY domain
SuperFamilySSF1182904.18E-24920988IPR003657WRKY domain
PROSITE profilePS5081120.943921984IPR003657WRKY domain
SMARTSM007745.5E-39926988IPR003657WRKY domain
PfamPF031063.1E-24927986IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.6E-2610431117IPR003657WRKY domain
PROSITE profilePS5081121.90710501113IPR003657WRKY domain
SuperFamilySSF1182901.02E-2310511117IPR003657WRKY domain
SMARTSM007741.6E-3610551117IPR003657WRKY domain
PfamPF031061.1E-2410561115IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043531Molecular FunctionADP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1169 aa     Download sequence    Send to blast
MGRRKLSIRK EVSPTTSVAW REESMDEAPI CAFGGAMFKL PGKLDGLLRQ GYMLPKGAED  60
EIPLIKRDLE EIVAILQDHI SRSEDPSVMV NCWMKEVREL SYDIEDCIDQ YQHAADSKSK  120
YVCKIPRRKF TSRKTNRLPE RLKQRLWMAN KIREFSARVQ EALQRHEMYN LGGVGRATPP  180
PPTYDMSFRS PHHIMHGEAA DLVGINAPMN KLEEWLIKDG EQKLKVVSIV GVGGIVFGPK  240
HECPPELAEV SNSIIRKCGG LPLASVTIAS LLARQMGKPE HWDYVNKSLG YGLRTNTTLE  300
GMKLVLNLSY NNLPHHLKAC MLYLSIYEHD HVIWKDDLVK QWIAEGFICA TAEQDKEEIS  360
GSYFDELVSR RMIQPVHIND NDEVLSCIVH HMVHNLITYK SIEENFAIAI DNSQTTTRLA  420
DKVHRLSLHF GNVEDATPPT NMRLSQVRTL AFFGVFKCMA SIVEFRLLQV LILHFWGDEE  480
SISFDLTRIS ELFRLRYLQV TCNVTLELRT QMRGLQYLET LKIDARVSAI PSDIVQLPGL  540
LHLNLPAETN LPNGIGHMAS LRTLGYFDLG CNSIENMQSL GELTNLRDLQ LTCYNIQPDN  600
LKNMQCLGSI LGKLSSLKSI TLVPAGSSNV NALEVADATS MSILGDGLSS VSSPPFLLQR  660
LELSPRVCIF SSFPKWIGHL CKLCILKIGV RGLARTVVDV LRGLPALTVL SLYVHTKPEE  720
RIVFDEVGFS VLKYFKFRCS VAWLKFGAGA MPNLRKLKIG FNAHAVDRHS TNIPVGIEHL  780
SGLKEISAKI GGASAEEPDG RSAESALSDA IRMHPGRPNV NIQCVDRMFG GKGDESSGIQ  840
EEEHMALQKQ YEIIEQDELQ GPEPVLPAFL EWGAETAFPF MSPETSHSQF TISDLIQQSA  900
THKKRKTSLK WSTQVRVSSV QDEGPLDDGF SWRKYGQKEI LGAKYPRGYF RCTHRHTQGC  960
HATKQAQRTD DDPLLFDVVY IGTHTCAQNT QPQPGQEQSF VSCKPAGTET SCVTATSLSP  1020
AKLESQVTIS DPIQGTTWHK ERKALPKSST RVSTLDDGFS WRKFGQKDTF GAKHPRGYYR  1080
CTHKYSRGCP ATKQVQRTDD DPPLFDVVYH GTHTCAQRTH SHDESQVTYA TVSSSTAAVQ  1140
IVPDVEIEEN ITDKKNLWEE SDNISFRR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-229261115168OsWRKY45
6s2p_N7e-20240396183339NRC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01001500G0110
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020161814.10.0putative disease resistance RPP13-like protein 2 isoform X1
RefseqXP_020161816.10.0putative disease resistance RPP13-like protein 2 isoform X3
TrEMBLA0A453LJ220.0A0A453LJ22_AEGTS; Uncharacterized protein
STRINGTraes_5DL_1733FB4DA.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27511933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.22e-32WRKY family protein