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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
PH01001577G0130 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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| Family |
GRAS |
| Protein Properties |
Length: 473aa MW: 50447 Da PI: 7.1072 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PH01001577G0130 | genome | ICBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 307.1 | 4.2e-94 | 112 | 471 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
v++L e+A++ ++gd+ a+++Larl+ + a +g+p+ R a+yf+eAL+ l+ +++ ++l++ ++++ ++ +l a+k+fsevsP+l+
PH01001577G0130 112 VDQLAEAAKHAEAGDAFGAREILARLNYRlpaAPTAGTPLLRSAFYFKEALRVALSTTGD---ASLASAASTPVDVLLKLGAYKAFSEVSPVLQ 202
689*************************999555566*******************9444...445666677778******************* PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
f+h+t+ qa+l+++ g+ ++H++Dfdi+ G QW++L+q+La+R+ + l++T+++s +s++ el+ ++e+L++fA elgvpf+f v+ +l
PH01001577G0130 203 FAHFTCVQAVLDELGGAGCIHVLDFDIGVGEQWASLMQELAQRRP-GAALKVTALVSTASHHPLELQLIHENLSNFAMELGVPFQFAVF---NL 292
******************************************965.589***************************************8...67 PP
GRAS 187 edleleeL.rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
+++++ +L ++ g a+aV+l + + + ++vL+l+++l +k+v+ v++ +d+++ +F++++++a++ y+ l++sl+a +++s
PH01001577G0130 293 ATMDPTDLlAIAGGNAIAVHLPVGSVHAS--------AVPSVLHLIRRLGAKLVISVDRSSDRSELPFAAHLFQAFQSYVFLLESLDAV-GTDS 377
7776665527788**********888886........4556*********************************************998.89** PP
GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
++++k+Er+l++++i+n+v ++++ ++ Wr ++ +aGF p+++s++a++qa++ll+kv+++g+rve++ gsl+l W++ +LvsvSaW
PH01001577G0130 378 DAASKIERFLIQPKIENCVVRRHRA-ATAGDKMLPWRTMFASAGFVPMQISSFAEAQADSLLKKVPVRGFRVEKRAGSLLLHWQRGELVSVSAW 470
************************9.66677799************************************************************ PP
GRAS 374 r 374
r
PH01001577G0130 471 R 471
8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 473 aa
Download sequence Send
to blast |
MEHPVLDLDH IPSMLPQPPM VGPNLPFPPP VEDTKPASFG PTPGHHHPHA AFHRAFPSYD 60 TAPPPPKRQH PMAEASTPKL PPFAGHAAAA GGFVPALKPK AEAASDDTAA AVDQLAEAAK 120 HAEAGDAFGA REILARLNYR LPAAPTAGTP LLRSAFYFKE ALRVALSTTG DASLASAAST 180 PVDVLLKLGA YKAFSEVSPV LQFAHFTCVQ AVLDELGGAG CIHVLDFDIG VGEQWASLMQ 240 ELAQRRPGAA LKVTALVSTA SHHPLELQLI HENLSNFAME LGVPFQFAVF NLATMDPTDL 300 LAIAGGNAIA VHLPVGSVHA SAVPSVLHLI RRLGAKLVIS VDRSSDRSEL PFAAHLFQAF 360 QSYVFLLESL DAVGTDSDAA SKIERFLIQP KIENCVVRRH RAATAGDKML PWRTMFASAG 420 FVPMQISSFA EAQADSLLKK VPVRGFRVEK RAGSLLLHWQ RGELVSVSAW RC*
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012618 | 1e-177 | CP012618.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 10 sequence. |