PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01001802G0210
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 130aa    MW: 14292.4 Da    PI: 10.6689
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01001802G0210genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.55e-0729642156
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
                     R RKk+++ e ++ v +L+ eN+ L++e++ l+  +
  PH01001802G0210 29 RPRKKMRLPEIQQLVRSLTVENDGLREEMKALQRAC 64
                     89*****************************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.6E-52967No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MGAILVWVAP AGRRPSILPA PPPRPAGQRP RKKMRLPEIQ QLVRSLTVEN DGLREEMKAL  60
QRACTALSKE NGKLETRLEQ SSKRKGIKSE EQQRKPQLDQ RAAEQNAQND FVLPDLNLPV  120
PDADGSAAP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12834RPRKKMR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01001802G0210
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0980021e-159FP098002.1 Phyllostachys edulis cDNA clone: bphyem125k10, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015693409.18e-59PREDICTED: uncharacterized protein LOC102714022
TrEMBLJ3MG952e-57J3MG95_ORYBR; Uncharacterized protein
STRINGOB06G30390.13e-58(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37902951