PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01001871G0100
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 258aa    MW: 28975.1 Da    PI: 9.744
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01001871G0100genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.13.4e-071251501742
                      HHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeN 42 
                      A+rsR RK+++i+eLe++v++L++e 
  PH01001871G0100 125 AQRSRVRKLQYIAELERRVQALQTEG 150
                      89********************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-5114173IPR004827Basic-leucine zipper domain
CDDcd147032.51E-15115165No hitNo description
SuperFamilySSF579593.6E-6124167No hitNo description
Gene3DG3DSA:1.20.5.1702.9E-7125167No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MYDNVFDGMR GGQIASLGGA PEYFLEPSSF ARPQGQGRPW ESRQMFQQGG GMPMPVREKN  60
GGHHHGPSSQ FGDHGHGAVP NGVDRKGHGD AAHDQRVGAE RKDGGAQLRH SQSEADTKRA  120
KQQYAQRSRV RKLQYIAELE RRVQALQTEG IEVSAEMDFL GQQNIMLDLE NKALKQRLES  180
LSQEQLIKRF QQEMFEREIG RLRSLFQQQQ QQQHIPQQQA PAHNRSSSRD LDSQFANMSL  240
KHNDSNSGRD AVPGLRI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01001871G0100
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0940100.0FP094010.1 Phyllostachys edulis cDNA clone: bphylf037c09, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015698470.11e-137PREDICTED: basic leucine zipper 6-like
TrEMBLA0A3L6T2U01e-139A0A3L6T2U0_PANMI; Uncharacterized protein
STRINGPavir.Ca00279.1.p1e-137(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33103666
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-48bZIP family protein