PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01001931G0070
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family G2-like
Protein Properties Length: 214aa    MW: 23699.1 Da    PI: 8.1013
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01001931G0070genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like51.42.5e-1620512455
          G2-like 24 sekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                     +++AtPkti+++m+vkgLtl h+kSHLQkYRl
  PH01001931G0070 20 IHEATPKTIMRTMGVKGLTLFHLKSHLQKYRL 51
                     579****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.33E-61653IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-141752IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-102152IPR006447Myb domain, plants
PfamPF143791.4E-2292137IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MQFDDVTVAT KRSLQQQIPI HEATPKTIMR TMGVKGLTLF HLKSHLQKYR LGKQSGKEMT  60
EQSKDASYLM EAQSGTNLSP RVPTPDVKES QEVKEALRAQ MEVQRRLHEQ VEVQKHVQIR  120
MEAYQKYIDT LLEKACKIVS EQLSGFSISD HDLPDLASAG VICDPADPLS PSVFHQLSVS  180
SISLQSPGGK ASPSALDGQL FFQKPPELKP KSC*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01001931G0070
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0390531e-139BT039053.1 Zea mays full-length cDNA clone ZM_BFb0367F20 mRNA, complete cds.
GenBankEU9678391e-139EU967839.1 Zea mays clone 306497 myb family transcription factor-related protein mRNA, complete cds.
GenBankJX4699811e-139JX469981.1 Zea mays subsp. mays clone UT3341 G2-like transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006659337.21e-109PREDICTED: myb family transcription factor APL-like
SwissprotQ94A571e-46PHL2_ARATH; Protein PHR1-LIKE 2
TrEMBLJ3MSE31e-111J3MSE3_ORYBR; Uncharacterized protein
STRINGOB08G20220.11e-112(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34273873
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.15e-49G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]