PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01001986G0070
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 184aa    MW: 20016.5 Da    PI: 8.9479
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01001986G0070genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.54e-1587135351
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                      +++r++r+++NRe+A rsR+RK+a++eeLe+++  L  eN +Lkk+ +e
  PH01001986G0070  87 DDRRTIRMMRNRESALRSRARKRAYVEELEKEARRLVDENLKLKKQCKE 135
                      589*************************************999987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.2E-1285163IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.55387132IPR004827Basic-leucine zipper domain
PfamPF001702.6E-1288136IPR004827Basic-leucine zipper domain
CDDcd147071.19E-1689135No hitNo description
SuperFamilySSF579594.81E-1189135No hitNo description
Gene3DG3DSA:1.20.5.1704.9E-1389135No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MANYHHYQMA VHSAAAAAAA AWREPDSPQL SIMSGCSSLF SISTLRDDDD GAVVLAGHAL  60
PATPVSLAGF AGDEVEMDVR QSGGSGDDRR TIRMMRNRES ALRSRARKRA YVEELEKEAR  120
RLVDENLKLK KQCKESTCSH WTAETGSGCT SPAYQELTAT NLINSILKGQ RSRRVFGSTK  180
LRG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01001986G0070
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0338582e-95BT033858.1 Zea mays full-length cDNA clone ZM_BFc0165B20 mRNA, complete cds.
GenBankJX4699612e-95JX469961.1 Zea mays subsp. mays clone UT3223 bZIP-type transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025812603.13e-79bZIP transcription factor 46-like
TrEMBLA0A2S3HG737e-78A0A2S3HG73_9POAL; Uncharacterized protein
TrEMBLA0A2T7DU087e-78A0A2T7DU08_9POAL; Uncharacterized protein
TrEMBLA0A3L6PES27e-78A0A3L6PES2_PANMI; Protein FD-like
STRINGSi007412m1e-75(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40173072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.14e-11bZIP family protein