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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PH01002205G0140 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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| Family |
GRAS |
| Protein Properties |
Length: 458aa MW: 48413.9 Da PI: 9.1629 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PH01002205G0140 | genome | ICBR | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 238.9 | 2.2e-73 | 132 | 456 | 30 | 373 |
GRAS 30 laspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGl 123
a+++gd+ qRl+a+++ AL +r+ + ++ p+++ ++ e+ aa +l+++vsP++ ++ aN +Ileav+ ++++H +Dfd+s +
PH01002205G0140 132 AANQRGDAEQRLVAMMVCALYSRVGS-----AAPAPSQHLADLCGGEQRAACQLLHDVSPCFGLALHSANLTILEAVSDHRAIHLVDFDVSA-A 219
478899*******************9.....444455555555588999999**************************************85.8 PP
GRAS 124 QWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrl 213
Q +aL++aLa+R+ ++ sl++T+v +p+s +++l +t erL+k+A++ g++f+fn+ ++ r +++e ++L ++pgEalaVnl+++l r+
PH01002205G0140 220 QHVALIKALADRRVPATSLKVTAVMDPTSPftpsLTQALTATSERLKKIAQQAGLDFRFNA-ISCRAAEIEASRLGCEPGEALAVNLAFALSRV 312
**************************99888998899************************.6889**************************** PP
GRAS 214 ldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerre 307
+desvs +++rde+L+ +e+++n++++++rf++a+ +y a+++sl+a+l+r+s er+ E++ l++++ n+v ega+r+e
PH01002205G0140 313 PDESVSPANPRDELLR--------------RELNTNTAPLAARFSDACAHYGAVLESLDATLGRDSAERARAEAA-LANKVANAVGLEGADRVE 391
*************998..............79******************************************9.9***************** PP
GRAS 308 rhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
r+e ++kWr+r+++aGF+pvpl++++a +k+ g+ v+ +sg l gW++r ++++SaW
PH01002205G0140 392 RCEVFGKWRARFGMAGFRPVPLGQDIAYRVKARFGPAR-PGFDVKPDSGRLGVGWNGRVVTVTSAW 456
**********************************9999.9************************** PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 458 aa
Download sequence Send
to blast |
MEPAGAPWCD PRRGYGYGVG SAVQAPMRQQ QPRSDIVAGA AVSGGGVLKR SLGEMERWEH 60 QRQVATQHAL YMRAVRQRTA AQSAFSPLNL GAVLGGARSP ASGFSGSSSF GGLSQQPSST 120 LSSLTTAPRM NAANQRGDAE QRLVAMMVCA LYSRVGSAAP APSQHLADLC GGEQRAACQL 180 LHDVSPCFGL ALHSANLTIL EAVSDHRAIH LVDFDVSAAQ HVALIKALAD RRVPATSLKV 240 TAVMDPTSPF TPSLTQALTA TSERLKKIAQ QAGLDFRFNA ISCRAAEIEA SRLGCEPGEA 300 LAVNLAFALS RVPDESVSPA NPRDELLRRE LNTNTAPLAA RFSDACAHYG AVLESLDATL 360 GRDSAERARA EAALANKVAN AVGLEGADRV ERCEVFGKWR ARFGMAGFRP VPLGQDIAYR 420 VKARFGPARP GFDVKPDSGR LGVGWNGRVV TVTSAWH*
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