PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01004399G0090
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 154aa    MW: 17084.7 Da    PI: 10.8064
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01004399G0090genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.48.6e-1034691348
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1 13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
                     NR +A+rsR RK++++ eLe+ v +L+ e +aL  +
  PH01004399G0090 34 NRQSAQRSRVRKLQYTSELERSVTTLQMEVSALSPR 69
                     ***************************999988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.5E-62586IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-102880No hitNo description
CDDcd147033.62E-143177No hitNo description
Gene3DG3DSA:1.20.5.1703.7E-123280No hitNo description
PfamPF001708.5E-83375IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MARAAMERML LGFQAAAPRP LLWAARAEAE VLANRQSAQR SRVRKLQYTS ELERSVTTLQ  60
MEVSALSPRV AFLDHQRSLL TVGNSHLKQR IAALAQDRIF KDAHQEALKQ EIERLRQLYH  120
HQQIKATGGA DIAAAASMQA KQELLACEGA AMR*
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01004399G0090
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By white light. {ECO:0000269|PubMed:18065552}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0962471e-171FP096247.1 Phyllostachys edulis cDNA clone: bphyst038a13, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015622790.17e-76basic leucine zipper 19
SwissprotQ6K3R96e-77BZP19_ORYSJ; Basic leucine zipper 19
TrEMBLA0A0D9VE894e-75A0A0D9VE89_9ORYZ; Uncharacterized protein
STRINGLPERR02G08830.17e-76(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-50bZIP family protein