PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK01815.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 193aa    MW: 22278.1 Da    PI: 10.2629
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK01815.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.8e-11105147547
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                ++ rr+++NRe+ArrsR RK++ +e+L+++v  L  eN++  +
  PK01815.1 105 RKRRRMISNRESARRSRMRKQKHLENLRNEVNRLRVENREVTN 147
                6789**********************************86554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.3E-13101165IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.588103166IPR004827Basic-leucine zipper domain
PfamPF001702.3E-8105148IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-9105177No hitNo description
SuperFamilySSF579596.75E-10105152No hitNo description
CDDcd147024.80E-19106153No hitNo description
PROSITE patternPS000360108123IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MISTFPPMFP SSDSILGNPF PSFDGGFTPW DYYLDLLPTT TIPTPELPEY TSNSPGSGDT  60
LPQSPKPIMS GSGSGSGSDD PNSNRSNPKR SLECPDRPVS VVEERKRRRM ISNRESARRS  120
RMRKQKHLEN LRNEVNRLRV ENREVTNRLR FVLYHLQLVR TENGQLRSEH ATLRQKLYDI  180
REILLYRQLQ QFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104108RKRRR
2104125RKRRRMISNRESARRSRMRKQK
3117124RRSRMRKQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAM4704782e-33AM470478.2 Vitis vinifera contig VV78X183888.10, whole genome shotgun sequence.
GenBankAM4886162e-33AM488616.1 Vitis vinifera contig VV78X030262.6, whole genome shotgun sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010106904.15e-78light-inducible protein CPRF2
TrEMBLA0A2P5AUV91e-93A0A2P5AUV9_PARAD; Basic-leucine zipper transcription factor
TrEMBLA0A2P5FS861e-93A0A2P5FS86_TREOI; Basic-leucine zipper transcription factor
STRINGXP_010106904.12e-77(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.11e-23basic leucine-zipper 5