PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK01823.3
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family G2-like
Protein Properties Length: 54aa    MW: 5943.47 Da    PI: 5.5851
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK01823.3genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like39.81e-122953125
    G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
               kpr+rWtpeLHerFveav++L G+e
  PK01823.3 29 KPRMRWTPELHERFVEAVNKLDGAE 53
               79*******************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.33E-52751IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.5E-102851IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-82952IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 54 aa     Download sequence    Send to blast
MSDDGFRSTA PPVDALLNVP SPGPAALHKP RMRWTPELHE RFVEAVNKLD GAEX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017183218.27e-17myb family transcription factor PHL6-like isoform X2
RefseqXP_028953632.17e-17myb family transcription factor PHL6-like isoform X1
RefseqXP_028953633.14e-17myb family transcription factor PHL6-like isoform X3
TrEMBLA0A2P5FLT07e-18A0A2P5FLT0_TREOI; Octamer-binding transcription factor
STRINGLus100357051e-16(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134691925
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13040.21e-11G2-like family protein