PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK03025.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family ERF
Protein Properties Length: 109aa    MW: 11907.4 Da    PI: 10.3587
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK03025.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2409.7e-1371109245
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAaka 45 
                 ++G+r ++ +g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a
  PK03025.1  71 FFRGIR-CR-SGKWVSEIREPKK---TTRVWLGTYPTPEMAAAA 109
                69***9.55.6*********854...5***************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.07859109IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-1071109IPR016177DNA-binding domain
SMARTSM003809.4E-571109IPR001471AP2/ERF domain
PfamPF008475.4E-672109IPR001471AP2/ERF domain
CDDcd000181.62E-1672109No hitNo description
Gene3DG3DSA:3.30.730.107.7E-1672109IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    Send to blast
MANPPTDLPK SDQPPNPSIS PSVIPQSELS PISSENQLPS PVTARPSEDP PPQNPFHSPR  60
TGSASVRKHP FFRGIRCRSG KWVSEIREPK KTTRVWLGTY PTPEMAAAA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024028659.19e-26ethylene-responsive transcription factor ERF027-like
TrEMBLA0A2P5C9W47e-34A0A2P5C9W4_TREOI; AP2/ERF domain containing protein
STRINGEOY246235e-21(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.17e-21ERF family protein