PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK03356.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family C2H2
Protein Properties Length: 258aa    MW: 28245.9 Da    PI: 10.4989
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK03356.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.0004192211323
                ETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                C+ Cgk F  ++ L++H++++
  PK03356.1 192 CSQCGKAF-KPEKLHSHMKSC 211
                ********.**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
XHSTTTKKLE ISTPLFNNNK VKRSKNNNEL DDSMRAAGSS SFSSPSSSSK SVPLSAKRKS  60
FSGGASNVLK SFITCRAVDT NDTVLVTVKH HGGCSGGFQK STGSVKGNTK PNNNNNNEKD  120
DQYVFTGGRR SFHTCWKYQE FEVQQPQNYN ARRSCDERSS TTTSSSKKDQ QSEFSKQRTI  180
PSAYRAAREP NCSQCGKAFK PEKLHSHMKS CRGMKTLGNK SNANTSVNKS TVLYSHQGSS  240
ATSSYKESAL AHFLTSSS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024031523.18e-48protein UPSTREAM OF FLC, partial
TrEMBLA0A2P5D3R21e-65A0A2P5D3R2_TREOI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83781620