PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK04701.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family ERF
Protein Properties Length: 79aa    MW: 9196.11 Da    PI: 12.7383
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK04701.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2331.5e-105179335
        AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgk 35
               ++GVr+++ +g+WvAeIr p++   r+r++lg+
  PK04701.1 51 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGT 79
               8******9.**********955...5*****98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.98E-134979No hitNo description
Gene3DG3DSA:3.30.730.102.8E-145079IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-85079IPR016177DNA-binding domain
SMARTSM003800.00295079IPR001471AP2/ERF domain
PROSITE profilePS5103213.7495079IPR001471AP2/ERF domain
PRINTSPR003673.4E-65162IPR001471AP2/ERF domain
PfamPF008471.2E-55179IPR001471AP2/ERF domain
PRINTSPR003673.4E-67379IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    Send to blast
XQQSKGFNGY NWLSPTKTQP MKNTGSSSSL QSQSQSQNQR QKSTFPSVKL FRGVRQRHWG  60
KWVAEIRLPR NRTRVWLGT
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008224508.11e-25PREDICTED: ethylene-responsive transcription factor ERF062
SwissprotQ9SVQ01e-20ERF62_ARATH; Ethylene-responsive transcription factor ERF062
TrEMBLA0A2P5F4175e-33A0A2P5F417_TREOI; AP2/ERF transcription factor
STRINGXP_008224508.15e-25(Prunus mume)
STRINGEMJ272017e-26(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101023141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.13e-21ERF family protein