PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PK05001.1

Organism

Cannabis sativa

Taxonomic ID

3483

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis

Family

bZIP

Protein Properties

Length: 156aa MW: 17811 Da PI: 9.4078

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PK05001.1	genome	CCBR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.7	6.8e-15	82	140	3	61
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ++k +r++kNRe+A rsR+RK+a+ +Le+++++L++eN++L+k+ ee++ke+a+ ++ PK05001.1 82 DDKHMKRMIKNRESACRSRARKEAYRTNLENEAAKLSEENRKLRKKQEEIEKEIAAEQK 140 68999************************************************997655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.4E-11	80	144	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.484	82	145	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.3E-12	83	137	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.05E-9	84	137	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.6E-12	85	144	No hit	No description
CDD	cd14707	8.85E-16	87	128	No hit	No description
PROSITE pattern	PS00036	0	87	102	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence Send to blast
MEDIWEDINL TSLPESNNIT VNSTQPQQII ITAATNYVPS MAFPFCNSHS STPPTPTTMF 60 YNSSSYGNKS LLPADNGYLP ADDKHMKRMI KNRESACRSR ARKEAYRTNL ENEAAKLSEE 120 NRKLRKKQEE IEKEIAAEQK QLSKKRTLHR TSTAPF

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3755	32	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17770.2	1e-14	basic region/leucine zipper motif 27