PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK05989.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 250aa    MW: 27805.5 Da    PI: 4.6204
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK05989.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.74.4e-12124166446
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                +k+ rr  +NR AA rsR+RKk++++eLe k+k Le+e ++L 
  PK05989.1 124 SKKRRRQVRNRDAAVRSRERKKMYVKELEMKSKYLEGECRRLG 166
                6999**********************************98764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.5E-11118180No hitNo description
SMARTSM003386.1E-7120185IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.875123165IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-10125180No hitNo description
PfamPF001707.8E-10125165IPR004827Basic-leucine zipper domain
CDDcd147043.94E-15126177No hitNo description
PROSITE patternPS000360128143IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
LGDELIEGID WDALLEWEPP VLTTDSSTSS PSSDPSSWID EIENLLMKED DQETTDPNPD  60
HEEDNEFCQN FLADILVESP ANESDEVHTA AENDANVFSD GNCNSGEEAV ATEADNQDAD  120
DPVSKKRRRQ VRNRDAAVRS RERKKMYVKE LEMKSKYLEG ECRRLGRLLQ FCYAENQALR  180
IASSSCYAFG GSTTTKQESA RALLGIPAVG FPAMVSSGHH HMPVYPATHS SSTKTTTKSK  240
SRTRSNKIKK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125144KRRRQVRNRDAAVRSRERKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFR7515560.0FR751556.1 Humulus lupulus mRNA for basic-leucine zipper (bZip4 gene), cultivar Osvald's 72, clone 3559.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018843068.14e-58PREDICTED: bZIP transcription factor 60-like
TrEMBLG7ZLA51e-92G7ZLA5_HUMLU; Basic-leucine zipper
STRINGXP_010094499.15e-54(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.13e-11basic region/leucine zipper motif 60