PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK06766.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family NAC
Protein Properties Length: 405aa    MW: 45116.4 Da    PI: 4.7122
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK06766.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.72e-145814920128
        NAM  20 kkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgekt 119
                +k  +g + ++ +vi++v+ +++ P++Lp      +  w++ +++ +k          ++ gyW+ +g+  +++s +++ +g ++tL f++g+ap+g+kt
  PK06766.1  58 EKMESGIPPPC-NVISDVNPFEHMPENLP------DGIWFYIMSKVEK---------DASFGYWRPKGEACQIFS-NSSITGWRNTLDFFEGQAPHGHKT 140
                44444444555.89**************9......2346665555544.........3568**************.999********************* PP

        NAM 120 dWvmheyrl 128
                +Wvm+ y +
  PK06766.1 141 NWVMQKYWI 149
                *******75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.85840171IPR003441NAC domain
SuperFamilySSF1019411.31E-1751169IPR003441NAC domain
PfamPF023652.0E-576147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
XLSQFASLTD IHSTDDHRSN FVTALLPLYQ AAMCPPATSP SHEISTFCSG EEIIMSMEKM  60
ESGIPPPCNV ISDVNPFEHM PENLPDGIWF YIMSKVEKDA SFGYWRPKGE ACQIFSNSSI  120
TGWRNTLDFF EGQAPHGHKT NWVMQKYWIT WNILPKDNNE KESLLCNIFV VDEQKSNHGM  180
PQKIARADMA SQSTQSVIQR SENYTGQSST SKPQTSEDNE IGNRVSAPTN LVDIVPPADS  240
DYLSGGDFLE LLDLQIPPSP SSSSDSSCVT MSSEECFDAL DLLADIESEK EKPFDLVQNN  300
AGCKLSVFVS SKPTEMVMHP ALTGTCKSQS KELEGSAKIP DEKVLKNPIK NQKPDLKIEG  360
TSSTCGNRLE SQGGNKTEEE EEEDKKEAHG RRKKLRKKYL CFMPF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024027738.11e-137NAC domain-containing protein 7
RefseqXP_024027739.11e-137NAC domain-containing protein 7
TrEMBLA0A2P5FZE71e-159A0A2P5FZE7_TREOI; NAC domain containing protein
STRINGXP_010106034.11e-125(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105882235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.12e-11NAC domain containing protein 53