PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK08841.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 195aa    MW: 22071.1 Da    PI: 10.483
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK08841.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.57.9e-15120175257
                XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                ++ kr  r++kNR +A r R+RK+a+++eLe k ++L++eN  L k++++ kk+ +
  PK08841.1 120 SPEKRFLRLMKNRDSADRARARKEAYTKELEIKLANLKKENALLHKQINSSKKKEP 175
                567999*********************************************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.3E-7119193IPR004827Basic-leucine zipper domain
PfamPF001708.6E-12121173IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.783121173IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.0E-9123172No hitNo description
Gene3DG3DSA:1.20.5.1702.6E-11123172No hitNo description
PROSITE patternPS000360127141IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MEEEVWKDIT LSALPETNSS DQPFPPTILQ DFLPIPLLSN PTSSPSSSSS TIHDISLSHH  60
PQHPSLSSFS LNSDPPDFGF HFLETRALVN SKPPQQKRDS TSNSSVQLIK KRATKKSVES  120
PEKRFLRLMK NRDSADRARA RKEAYTKELE IKLANLKKEN ALLHKQINSS KKKEPSVHQC  180
PKKRTSLYRT LTAPF
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3207322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.22e-10basic region/leucine zipper motif 27