PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK09021.2
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 244aa    MW: 27750.3 Da    PI: 9.131
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK09021.2genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.34.4e-104587345
               XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
               + k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  PK09021.2 45 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 87
               568899************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.2E-83790No hitNo description
PfamPF077162.6E-74389IPR004827Basic-leucine zipper domain
SMARTSM003389.8E-843106IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4154589IPR004827Basic-leucine zipper domain
CDDcd147082.54E-244799No hitNo description
SuperFamilySSF579592.75E-74790No hitNo description
PROSITE patternPS0003605065IPR004827Basic-leucine zipper domain
PfamPF141444.5E-30129202IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MADASPRTDI STDVDTDEKN QMFDRGQYGL MAASDSSDRS KDKSDQKTLR RLAQNREAAR  60
KSRLRKKAYV QQLESSRLKL TQLEQELQRA RQQGIFISSS GDQAHSMSGN GAMAFDVEYG  120
RWLEEQNRQI NELRSAVNSH AGDTELRIIN DGILAHYDEI FRLKGVAAKT DVFHLLSGMW  180
KTPAERCFLW LGGFRSSELL KVKFPQTRTL VLNIFPNQHI GSFPKLECIM SSYTSIEGFS  240
CLFK
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters (By similarity). {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP4628770.0KP462877.1 Boehmeria nivea bZIP3 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015894780.11e-135transcription factor TGA2.2-like isoform X2
RefseqXP_024934309.11e-135transcription factor TGA2.2-like isoform X1
SwissprotQ391401e-116TGA6_ARATH; Transcription factor TGA6
TrEMBLA0A0H3W7L51e-136A0A0H3W7L5_BOENI; BZIP3
STRINGXP_010095986.11e-133(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.29e-99TGACG motif-binding factor 6