PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PK09653.2

Organism

Cannabis sativa

Taxonomic ID

3483

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis

Family

bZIP

Protein Properties

Length: 100aa MW: 10874.7 Da PI: 10.6506

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PK09653.2	genome	CCBR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	19.8	1.7e-06	81	99	1	19
XXXXCHHHCHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArr 19 ++elkrerrkq+NRe+Arr PK09653.2 81 DRELKRERRKQSNRESARR 99 689***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.2E-4	74	99	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 100 aa Download sequence Send to blast
XTPTTGDEKT EKQINSVSDK IMGASFSAAG VSAKLVGPVL SPGMTTAFDL RNPTNLSPKT 60 SPSGFNQTCT VLPSDSWVPN DRELKRERRK QSNRESARRX

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By light.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024019007.1	1e-35	common plant regulatory factor 1
Refseq	XP_024019008.1	1e-35	common plant regulatory factor 1
Refseq	XP_024019009.1	1e-35	common plant regulatory factor 1
Swissprot	Q99089	8e-21	CPRF1_PETCR; Common plant regulatory factor 1
TrEMBL	A0A2P5E8F9	8e-40	A0A2P5E8F9_TREOI; Basic-leucine zipper transcription factor
STRING	XP_010092905.1	6e-34	(Morus notabilis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	4e-11	G-box binding factor 3

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115] Feldbrügge M,Hahlbrock K,Weisshaar B The transcriptional regulator CPRF1: expression analysis and gene structure. Mol. Gen. Genet., 1996. 251(6): p. 619-27 [PMID:8757392]