PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK09738.2
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 200aa    MW: 22039.2 Da    PI: 5.6575
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK09738.2genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_153.36.2e-1757117363
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                ++kr rr+ +NRe+ArrsR+RK+a ++ Le  v++L +eN+ L k+l + ++++ + ++++
  PK09738.2  57 DVKRIRRMVSNRESARRSRRRKQAHLADLEIQVEQLRGENSCLYKQLTNASQQYREADTDN 117
                68*******************************************9999999998877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-1655119IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-1255111No hitNo description
PROSITE profilePS5021710.95557120IPR004827Basic-leucine zipper domain
PfamPF001704.2E-1457111IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.38E-1258110No hitNo description
PROSITE patternPS0003606277IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
GRRSINKGIK EDDDEQAIGG GGGGTSGSSH EQSDDDDIDI EAGPCEQSTD AIVINHDVKR  60
IRRMVSNRES ARRSRRRKQA HLADLEIQVE QLRGENSCLY KQLTNASQQY READTDNRVL  120
KSDVEAMRAR VKLAEDMVAR GSLTSSLNQL IQTHLNTSTT TATTTHFNNN SNNVSPTITL  180
VQAPPMMNSD SVSCVSEIWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17178RRSRRRKQ
27378SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002283059.21e-66PREDICTED: basic leucine zipper 9
SwissprotQ9FUD37e-62BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A2P5DT351e-74A0A2P5DT35_PARAD; Basic-leucine zipper transcription factor
STRINGVIT_04s0008g02750.t015e-66(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.12e-44basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]