PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK09793.2
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family GRF
Protein Properties Length: 95aa    MW: 11022.6 Da    PI: 10.3266
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK09793.2genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC31.23.8e-107894117
        WRC  1 daepgrCrRtDGKkWRC 17
               d+epgrCrRtDGKkWRC
  PK09793.2 78 DPEPGRCRRTDGKKWRC 94
               79*************** PP
2QLQ60.45.1e-21842236
        QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
               +FTa+Q+q+L++Q+l++Ky++++ P+Pp+Ll+ ++
  PK09793.2  8 PFTASQWQELEHQALIFKYMVSGIPIPPDLLFTLK 42
               8*****************************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009512.7E-11743IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088803.9E-16841IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166621.935843IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166713.7477895IPR014977WRC domain
PfamPF088797.6E-77994IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    Send to blast
MSGKTRFPFT ASQWQELEHQ ALIFKYMVSG IPIPPDLLFT LKRSYLDSTA VLPSKLFPHH  60
SQHVGWNCFQ MGLGRKIDPE PGRCRRTDGK KWRCX
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Acts together with GIF1 for the development of appropriate leaf size and shape through the promotion and/or maintenance of cell proliferation activity in leaf primordia. {ECO:0000269|PubMed:15326298, ECO:0000269|PubMed:15960617}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024932189.13e-57growth-regulating factor 5-like isoform X7
SwissprotQ8L8A62e-38GRF5_ARATH; Growth-regulating factor 5
TrEMBLA0A2P5BXX42e-59A0A2P5BXX4_PARAD; Growth-regulating factor
STRINGEMJ059773e-50(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40433459
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.17e-41growth-regulating factor 5