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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PK11281.7 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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| Family | NAC | ||||||||
| Protein Properties | Length: 54aa MW: 6226.21 Da PI: 4.9645 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 53.1 | 1e-16 | 1 | 47 | 3 | 49 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k 49
pGfrF Ptdeelv +yLk k+ gk+l++ +vi e+d+yk+eP++Lp +
PK11281.7 1 PGFRFYPTDEELVLYYLKGKICGKRLRV-NVIGETDVYKFEPEELPgM 47
8***************************.99**************933 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Pfam | PF02365 | 9.5E-8 | 1 | 42 | IPR003441 | NAC domain |
| SuperFamily | SSF101941 | 7.59E-18 | 1 | 49 | IPR003441 | NAC domain |
| PROSITE profile | PS51005 | 19.326 | 1 | 54 | IPR003441 | NAC domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 54 aa Download sequence Send to blast |
PGFRFYPTDE ELVLYYLKGK ICGKRLRVNV IGETDVYKFE PEELPGMSIL KTGD |
| Functional Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). Transcriptional activator that acts as positive regulator of AOX1A during mitochondrial dysfunction. Binds directly to AOX1A promoter. Mediates mitochondrial retrograde signaling. {ECO:0000269|PubMed:24045017}. | |||||
| Regulation -- Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | INDUCTION: By cold and drought stresses. {ECO:0000269|PubMed:17158162}. | |||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_024162540.1 | 1e-25 | NAC domain-containing protein 17-like isoform X1 | ||||
| Refseq | XP_024162541.1 | 1e-25 | NAC domain-containing protein 17-like isoform X2 | ||||
| Refseq | XP_024162542.1 | 1e-25 | NAC domain-containing protein 17-like isoform X3 | ||||
| Refseq | XP_024162543.1 | 1e-25 | NAC domain-containing protein 17-like isoform X3 | ||||
| Refseq | XP_027935892.1 | 1e-25 | NAC domain-containing protein 17-like | ||||
| Swissprot | Q9XIC5 | 4e-25 | NAC17_ARATH; NAC domain-containing protein 17 | ||||
| TrEMBL | A0A2P5FR66 | 3e-25 | A0A2P5FR66_TREOI; NAC domain containing protein | ||||
| STRING | evm.model.supercontig_26.135 | 4e-25 | (Carica papaya) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Fabids | OGEF11433 | 17 | 39 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G34190.1 | 2e-27 | NAC domain containing protein 17 | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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