PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK14065.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 179aa    MW: 20505.9 Da    PI: 6.7997
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK14065.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.38.9e-153189563
               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
               ++ +r+ +NRe+ArrsR RK++ ++eL   v eL++ N++ ++ l+  ++++ +l++e+
  PK14065.1 31 RKRKRMLSNRESARRSRMRKQQHMDELVSQVGELKKDNSQIINSLNITNQMYLNLEAEN 89
               67899**************************************************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-162791IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.4732992IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.85E-133185No hitNo description
PfamPF001703.1E-113189IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-113175No hitNo description
CDDcd147024.77E-193282No hitNo description
PROSITE patternPS0003603449IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MAGSSSTATG SSSGYSDQEA GRVDVKVVDQ RKRKRMLSNR ESARRSRMRK QQHMDELVSQ  60
VGELKKDNSQ IINSLNITNQ MYLNLEAENS VLRAQMGELT HRLQSLNEII DCINSSTTTT  120
TETTTSPYPF DHHHHHHNNQ IFDDQDSQMM MMMMINPWNS LPLNQPIMAA SADHQMYMY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14350RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to specific DNA sequences in target gene promoters. BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240). {ECO:0000250|UniProtKB:O65683, ECO:0000269|PubMed:29348240}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00267DAPTransfer from AT2G18160Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109918.12e-51bZIP transcription factor 11
SwissprotQ9SI152e-40BZIP2_ARATH; bZIP transcription factor 2
TrEMBLA0A2P5FP841e-67A0A2P5FP84_TREOI; Basic-leucine zipper transcription factor
STRINGXP_010109918.17e-51(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18160.15e-34basic leucine-zipper 2
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]