PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK15395.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family GRAS
Protein Properties Length: 57aa    MW: 6176.81 Da    PI: 5.6982
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK15395.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS35.51.4e-111561065
       GRAS 10 eavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalp 65
               eav+ +d   a +lL +++ + s +g+  qRl++yf +AL+arl++ ++ely al+
  PK15395.1  1 EAVAVNDRDTAAELLLQIRRNTSISGNGSQRLTHYFGNALEARLNGIGNELYTALS 56
               589999**********************************************9886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035144.9E-9156IPR005202Transcription factor GRAS
PROSITE profilePS5098511.137157IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 57 aa     Download sequence    Send to blast
EAVAVNDRDT AAELLLQIRR NTSISGNGSQ RLTHYFGNAL EARLNGIGNE LYTALST
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006409947.15e-17scarecrow-like protein 33
RefseqXP_024016820.15e-17scarecrow-like protein 33
SwissprotP0C8831e-17SCL33_ARATH; Scarecrow-like protein 33
TrEMBLA0A2P5DQI72e-21A0A2P5DQI7_PARAD; GRAS transcription factor
STRINGXP_006409947.12e-16(Eutrema salsugineum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.16e-20GRAS family protein