PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK16522.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 305aa    MW: 32983.1 Da    PI: 5.6872
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK16522.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.57.7e-15231290361
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklks 61 
                + +r+rr++kNRe+A rsR+RK+a++ eLe+ + +Le+eN++L k+++e+ k+  ++l  
  PK16522.1 231 AQQRQRRMIKNRESAARSRERKQAYQVELETLAVKLEEENDRLlKEKAERTKERFKQLME 290
                679**************************************9725668888888777755 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-12226289No hitNo description
SMARTSM003381.1E-10229293IPR004827Basic-leucine zipper domain
PfamPF001702.0E-12231289IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.726231283IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.03E-9233284No hitNo description
CDDcd147078.71E-18233279No hitNo description
PROSITE patternPS000360236251IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MASSKVLASS NSRNSDLSRK SSSASSSAVR RPKLSISDQQ SKINGGDRTV KSSLDSMTVD  60
GYLRTEASAI TAESTLLDAQ ITLIDPTPTT SISAAAVAVA PGDLNSGSIG SSSAPKTVDE  120
VWREIVSGDR KECKEEEQDM VMTLEDFLLA KTGIASVEDE DVKSLPAPIT ERLSGGLFAF  180
DSIPPSPLQA LDNVEGSIIG FGNGVEVIGG GGGGGRGKRG RNVLEPLDKA AQQRQRRMIK  240
NRESAARSRE RKQAYQVELE TLAVKLEEEN DRLLKEKAER TKERFKQLME KIIPIEEKQR  300
PPRIL
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015886437.11e-121G-box-binding factor 4-like
SwissprotP427774e-56GBF4_ARATH; G-box-binding factor 4
TrEMBLB5WZ501e-150B5WZ50_HUMLU; Basic-leucine zipper
STRINGevm.model.supercontig_21.2073e-99(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.11e-55bZIP family protein