PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK18353.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family NF-YB
Protein Properties Length: 81aa    MW: 9655.18 Da    PI: 7.2556
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK18353.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB30.49.5e-102277297
      NF-YB 72 atlGfedyveplkvylkkyrelegek 97
               +tlGfe+yv plkvyl+kyre+egek
  PK18353.1  2 TTLGFENYVGPLKVYLEKYREIEGEK 27
               79*********************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.20.102.2E-9264IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    Send to blast
XTTLGFENYV GPLKVYLEKY REIEGEKLNI PKQQRSTDQQ RQLIHQQQQQ QLLLDHHHHH  60
QDQQSSNHLL PNFNALYSST X
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021630565.11e-19nuclear transcription factor Y subunit B-7
TrEMBLA0A2C9UX023e-18A0A2C9UX02_MANES; Uncharacterized protein
STRINGcassava4.1_024313m4e-19(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G13570.18e-12nuclear factor Y, subunit B7