PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK18699.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 584aa    MW: 63456.2 Da    PI: 6.7109
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK18699.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.58.9e-11394452563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                kr++r   NR +A rs +R+  +i eLe kv++L++e ++L  ++ +l+  +  l+s++
  PK18699.1 394 KRAKRILANRQSAARSKERRSRYISELEHKVQTLQTEATTLSAQVTKLQRDSVGLTSQN 452
                9*********************************************9999888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-15390454IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.909392455IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.0E-11394451No hitNo description
SuperFamilySSF579593.45E-10394445No hitNo description
PfamPF001704.0E-9394452IPR004827Basic-leucine zipper domain
CDDcd147032.04E-22395444No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 584 aa     Download sequence    Send to blast
MEGTSETMQR PNNSAFGFGT SQMGILPLNQ LSPNLSPDSS KRPGIPPSHP NNPMIHSLPY  60
SKGTGVRSGN WQSTPPPPQN TSPGPSHNRS LSQPSFFSLD SLPPLSPSPH REPSHSSLSD  120
PASNDVTMEE NVVNSNSQSL PSPVNRGGAF RAGESLPPRK GHRRSSSDIL LGFSAMIQSS  180
PQLIPISSRG VLDGAVSGRE NQNQLVKQEH SKDNGNNTGN GMESKRSEGE IADDLFSAYM  240
NLENIDKVNS PGTEDKDFDS RASGSKTNGC ESSDNEVESS INANPNSISG SSSGFGNGKR  300
EGVKRAAPGD IAPTSRHYRS LSMDSYMGSL QFDDESLKLL PLGTGAGLQS PNSLADGNSA  360
KFGMEFPNGE FNAVELKKIM ESEKLTEIAL SDPKRAKRIL ANRQSAARSK ERRSRYISEL  420
EHKVQTLQTE ATTLSAQVTK LQRDSVGLTS QNSELKFRVQ AMEQQAQLKD ALNDALRAEV  480
QRLKLTAAEL SGEAHLSNCM AQQLSINQQM YQMQHRQTVQ LNLYQMQQQQ QHNEMSSQPC  540
SGEVTEHESS KWGGWPVPQF SCDYSEVASG LVNLVKTIGI YVKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010105258.10.0transcription factor RF2a
RefseqXP_024027168.10.0transcription factor RF2a
TrEMBLA0A2P5DBU60.0A0A2P5DBU6_PARAD; Basic-leucine zipper transcription factor
STRINGXP_010105258.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-107bZIP family protein