PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK21055.2
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bHLH
Protein Properties Length: 141aa    MW: 16746.7 Da    PI: 9.5954
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK21055.2genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.31.8e-10105134130
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
        HLH   1 rrrahnerErrRRdriNsafeeLrellPka 30 
                +r++h ++Er+RR+++N+ ++ Lr+l+P++
  PK21055.2 105 QRMTHIAVERNRRRQMNDHLNVLRSLMPTS 134
                79**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.8E-996135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-8103136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.42E-7103138No hitNo description
PROSITE profilePS5088811.312104141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.2E-8105134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
QHQIQGLELE SCVTNEIAEL HSPIKSETKD LHYHHYSTTE QQQAGVSSEC NQQERQPNKN  60
VAEEEQQEKT LFKQTQNSKF PPVTRERRKR KRTRPAKNKE EVESQRMTHI AVERNRRRQM  120
NDHLNVLRSL MPTSYIQRVC I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18691RRKRKR
2105116RMTHIAVERNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021822676.19e-40transcription factor bHLH57 isoform X2
RefseqXP_023896624.11e-39transcription factor bHLH70-like isoform X1
TrEMBLA0A2P5FHC35e-49A0A2P5FHC3_TREOI; Basic helix-loop-helix transcription factor
STRINGEMJ192392e-38(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68943449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.13e-22bHLH family protein