PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK21096.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family ERF
Protein Properties Length: 121aa    MW: 13593.8 Da    PI: 10.2828
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK21096.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.67.3e-0992120234
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslg 34 
                 y+GVr +  +g+Wv+eIr+p++   + r++lg
  PK21096.1  92 TYRGVRMRN-WGKWVSEIREPRK---KSRIWLG 120
                69****998.**********843...59***98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.108.7E-1492120IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-892120IPR016177DNA-binding domain
SMARTSM003800.007792121IPR001471AP2/ERF domain
PROSITE profilePS5103213.41992121IPR001471AP2/ERF domain
PRINTSPR003672.3E-593104IPR001471AP2/ERF domain
CDDcd000182.26E-1393120No hitNo description
PRINTSPR003672.3E-5115121IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
MAEEINMESD AQENLLSTTT TTTTSCSSSS SSSSLEFSSK FFGGLNQKYT KNADQNGSPK  60
AVEGMKNGCI KGSNDQQSKK RSRSNEENKH PTYRGVRMRN WGKWVSEIRE PRKKSRIWLG  120
X
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015887656.16e-24ethylene-responsive transcription factor ERF034
TrEMBLA0A2P5EJ482e-33A0A2P5EJ48_TREOI; AP2/ERF domain containing protein
STRINGEMJ199987e-22(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-20ERF family protein