PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK21227.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 239aa    MW: 26789.2 Da    PI: 6.2548
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK21227.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.16e-11106149548
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  +
  PK21227.1 106 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 149
                8999********************************98877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-13102166IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.622104156IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-11106157No hitNo description
SuperFamilySSF579592.11E-11106160No hitNo description
PfamPF001701.9E-9106149IPR004827Basic-leucine zipper domain
CDDcd147037.41E-22107157No hitNo description
PROSITE patternPS000360109124IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
XLPGSGGHGE FDRFDDEQFM SMFNDEMASM AVAGPNVSSS NPSTPSDHNS INDEKEMQVD  60
RSSSKQQQHV KNESEEVDSQ CNSDSNPNPN GTTTTNAAND RIIDPKRVKR ILANRQSAQR  120
SRVRKLQYIS ELERSVTSLQ AEVSVLSPRV AFLDHQRLLL NVDNSALKQR IAALAQDKIF  180
KDAHQEALKR EIERLRQVYH QQNMNKMENN NVGQSPSSMG DTTKSSIDKN DQQLLNVSS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023928738.11e-111basic leucine zipper 61-like
SwissprotQ9M2K43e-92BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A2P5E7U21e-117A0A2P5E7U2_TREOI; Basic-leucine zipper transcription factor
STRINGXP_006469052.11e-107(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.15e-81bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]