PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PK22181.1

Organism

Cannabis sativa

Taxonomic ID

3483

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis

Family

Protein Properties

Length: 72aa MW: 7982.09 Da PI: 10.7816

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PK22181.1	genome	CCBR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.4	3.5e-10	3	32	60	90
EE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 60 vltkGWkeFvkangLkegDfvvFkldgrsef 90 +++GWk Fv++n+Lk+gD++ F + + s + PK22181.1 3 RIESGWKAFVQDNDLKVGDVCAFVFRK-SIG 32 5789*******************9755.444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50863	11.025	1	44	IPR003340	B3 DNA binding domain
CDD	cd10017	3.64E-9	2	41	No hit	No description
SuperFamily	SSF101936	5.89E-10	3	45	IPR015300	DNA-binding pseudobarrel domain
Gene3D	G3DSA:2.40.330.10	2.8E-9	3	44	IPR015300	DNA-binding pseudobarrel domain
Pfam	PF02362	2.3E-7	4	30	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 72 aa Download sequence Send to blast
XFRIESGWKA FVQDNDLKVG DVCAFVFRKS IGRILFEVVI FHNNGVANSP MAMLPIPAAN 60 KRSSTTPSKP KI

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF14300	4	16