PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK22350.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 190aa    MW: 21065.4 Da    PI: 6.5408
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK22350.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1491.3e-15109168361
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklks 61 
                  +++rr++kNRe+A rsR+RK+a +++Le+ v eLe+eN +L ++e+e+ ++  ++l  
  PK22350.1 109 TAQKQRRMIKNRESAARSRERKQACQAQLETLVSELEEENAQLlREEVERTQQRFQQLME 168
                6799************************************99538999999999998866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-13103167No hitNo description
SMARTSM003386.9E-9107169IPR004827Basic-leucine zipper domain
PfamPF001701.0E-13108168IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.3109154IPR004827Basic-leucine zipper domain
CDDcd147071.78E-16111157No hitNo description
SuperFamilySSF579592.39E-10111167No hitNo description
PROSITE patternPS000360114129IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
XLQDSQPLAS FPIAGADESW SGAVAGGSDW KTDSVEIGSG MTLEDYLTHN EAVREDVRAP  60
LGYGQFHMPP PLQFQAVENP IGVCGNGSGS GSSGRGKRQA FEPPVDKATA QKQRRMIKNR  120
ESAARSRERK QACQAQLETL VSELEEENAQ LLREEVERTQ QRFQQLMENV IPAEEKKKCP  180
RVLRRVKSLP
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015886309.12e-54ABSCISIC ACID-INSENSITIVE 5-like protein 7
SwissprotP427771e-30GBF4_ARATH; G-box-binding factor 4
TrEMBLC9X4P51e-103C9X4P5_HUMLU; Basic-leucine zipper
STRINGVIT_12s0055g00420.t015e-42(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.12e-30bZIP family protein