PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK22951.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family ERF
Protein Properties Length: 99aa    MW: 11198 Da    PI: 5.1327
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK22951.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.51.4e-077998121
        AP2  1 sgykGVrwdkkrgrWvAeIrd 21
               s y+GVr+++ +g+++AeIrd
  PK22951.1 79 SSYRGVRRRP-WGKYAAEIRD 98
               67********.*********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103210.1388099IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.5E-88098IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    Send to blast
XNFSSSSSST SSISSLESLS WSELLDFHND TVLFEELLNG TPQLQYDVVK AERVEEGHHV  60
INQNDDVVIT KGEMTKKSSS YRGVRRRPWG KYAAEIRDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-10ethylene response factor 1