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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PK23720.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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| Family | B3 | ||||||||
| Protein Properties | Length: 108aa MW: 12404.1 Da PI: 7.8907 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 36.7 | 7.6e-12 | 7 | 74 | 32 | 97 |
--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
B3 32 esktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
++ +++l+ ++gr W+ ++++ +k++ + + +GW+eF+k +L+ gD+++F+l + ++++ v+++
PK23720.1 7 QG-DVILTGPNGRYWSSEFKMrtvkTKNP-GPRICNGWREFAKGYNLEIGDVCIFELLDGIQTTFEVSIV 74
33.89**********99997765533333.377889********************88766666777776 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS50863 | 12.196 | 1 | 77 | IPR003340 | B3 DNA binding domain |
| CDD | cd10017 | 1.82E-14 | 5 | 75 | No hit | No description |
| SuperFamily | SSF101936 | 8.63E-14 | 5 | 78 | IPR015300 | DNA-binding pseudobarrel domain |
| Gene3D | G3DSA:2.40.330.10 | 4.3E-12 | 6 | 75 | IPR015300 | DNA-binding pseudobarrel domain |
| Pfam | PF02362 | 7.5E-9 | 7 | 74 | IPR003340 | B3 DNA binding domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 108 aa Download sequence Send to blast |
MTYIKNQGDV ILTGPNGRYW SSEFKMRTVK TKNPGPRICN GWREFAKGYN LEIGDVCIFE 60 LLDGIQTTFE VSIVRFAEYE CCQWSQDSKY ANGGSKAYKD VKVKIEIE |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| TrEMBL | A0A2P5FXZ3 | 5e-32 | A0A2P5FXZ3_TREOI; B3 DNA binding domain containing protein | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Fabids | OGEF16088 | 5 | 9 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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