PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PK27149.1

Organism

Cannabis sativa

Taxonomic ID

3483

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis

Family

bZIP

Protein Properties

Length: 95aa MW: 11183.3 Da PI: 10.6451

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PK27149.1	genome	CCBR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	53.3	5.9e-17	28	80	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++ rr+++NRe+ArrsR RKk +eeL+e v +L+aeN++Lk++l ++ +++ PK27149.1 28 RKLRRMISNRESARRSRWRKKRHLEELTEQVNQLKAENRDLKNRLGHMAQQCH 80 6789*******************************************999996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.0E-17	24	88	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.9E-14	25	80	No hit	No description
PROSITE profile	PS50217	11.438	26	78	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.06E-13	28	81	No hit	No description
Pfam	PF00170	6.4E-14	28	80	IPR004827	Basic-leucine zipper domain
CDD	cd14702	4.84E-15	29	80	No hit	No description
PROSITE pattern	PS00036	0	31	46	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 95 aa Download sequence Send to blast
XELWSLLQPG TNSGSEGSSR AVYSVDERKL RRMISNRESA RRSRWRKKRH LEELTEQVNQ 60 LKAENRDLKN RLGHMAQQCH VAWTENDRLS SEFLA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021821617.1	9e-41	basic leucine zipper 4
TrEMBL	A0A2P5CWW1	2e-46	A0A2P5CWW1_PARAD; Basic-leucine zipper transcription factor
STRING	XP_008220396.1	4e-39	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5996	30	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18160.1	6e-19	basic leucine-zipper 2