PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK28779.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family ERF
Protein Properties Length: 155aa    MW: 17001.7 Da    PI: 6.2658
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK28779.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.92.8e-092273055
        AP2 30 rfslgkfgtaeeAakaaiaarkkleg 55
               r++lg+f ta eAa+a+++a+ +++g
  PK28779.1  2 RVWLGTFETAIEAARAYDRAAFRMRG 27
               89**********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.038135IPR001471AP2/ERF domain
SMARTSM003801.7E-7141IPR001471AP2/ERF domain
PfamPF008479.0E-6227IPR001471AP2/ERF domain
CDDcd000185.32E-17235No hitNo description
Gene3DG3DSA:3.30.730.108.0E-17236IPR001471AP2/ERF domain
SuperFamilySSF541714.45E-11237IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
XRVWLGTFET AIEAARAYDR AAFRMRGSKA ILNFPLEAGR SPMPESTEVH APANCTVLKR  60
RRGSDEDKEV IREAKELKKE ETTSSTLTES TTSSNDHQEV NSSGSSNGNS AVVPLTPSNW  120
TSVWDSQDVK GIFTVPPLSP LSPHFSIGYS QLMVI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010275423.18e-41PREDICTED: ethylene-responsive transcription factor ERF105-like
RefseqXP_011101098.14e-41ethylene-responsive transcription factor 5
TrEMBLA0A2P5F3R91e-58A0A2P5F3R9_TREOI; AP2/ERF transcription factor
STRINGXP_010275423.13e-40(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108534109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-15ERF family protein