PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK29021.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family ERF
Protein Properties Length: 93aa    MW: 10249.1 Da    PI: 8.7622
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK29021.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.24.6e-096689226
        AP2  2 gykGVrwdkkrgrWvAeIrdpseng 26
               +++GVr+++ +g+++AeIrdp++ng
  PK29021.1 66 HFRGVRRRP-WGKYAAEIRDPKKNG 89
               58*******.***********9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.5E-106692IPR001471AP2/ERF domain
PROSITE profilePS5103211.5486693IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-66692IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    Send to blast
XTDLALLDSI SQYLLQDDFN LSNVSCSFNV GSSISSPPPP PITDGASTDH GCSLEVARER  60
KIPVMHFRGV RRRPWGKYAA EIRDPKKNGA RVX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015869086.11e-18ethylene-responsive transcription factor 2-like
RefseqXP_015902192.15e-18ethylene-responsive transcription factor ERF098-like
TrEMBLA0A371E5V41e-17A0A371E5V4_MUCPR; Ethylene-responsive transcription factor 13 (Fragment)
STRINGXP_009341338.19e-16(Pyrus x bretschneideri)
STRINGXP_010089319.18e-16(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51233157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.13e-14ERF family protein