PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00030125-RA
Organism
Pseudotsuga menziesii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family BES1
Protein Properties Length: 304aa    MW: 32736.6 Da    PI: 7.6964
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00030125-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822158.35.3e-492101197
            DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpleeaeaagssasasp 90 
                       +++gr pt kErEnnkrRERrRRaiaaki+aGLR +Gnyklpk++DnneVlkALc+eAGw+v++DG+tyr   +g+ +  e e  g s+s s 
  PSME_00030125-RA   2 TSGGRLPTSKERENNKRRERRRRAIAAKIFAGLRLYGNYKLPKHCDNNEVLKALCAEAGWIVDQDGNTYRpgsQGCTRIPEREDCGISSSPSA 94 
                       589*******************************************************************88888888888888898888777 PP

            DUF822  91 esslqss 97 
                        + + +s
  PSME_00030125-RA  95 VAATYQS 101
                       6655434 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.2E-443100IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MTSGGRLPTS KERENNKRRE RRRRAIAAKI FAGLRLYGNY KLPKHCDNNE VLKALCAEAG  60
WIVDQDGNTY RPGSQGCTRI PEREDCGISS SPSAVAATYQ SGNGSLIPWL KGLGNSRLAT  120
QRTLPPLQII TGGNCSAPVT PPLTSPTVRS PYGKSVWDAV NRESSALWSF QATSAMCHSN  180
CESGFSVQGA DSCSNAANVA EYANNLMVSE NVAISPSSIQ GNEDGMTFSF GPLNPINEGL  240
STAWKPVGTG NARTVIHDVE VEHGKIASGV RAWEGEKIHH MRSEELELEL TLGCSSREAS  300
ERPT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-182590391452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-182590391452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-182590391452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-182590391452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5AE361e-157D5AE36_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-39BES1/BZR1 homolog 4