PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00041126-RA
Organism
Pseudotsuga menziesii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family bZIP
Protein Properties Length: 227aa    MW: 24607.4 Da    PI: 7.4523
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00041126-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.84.6e-081201602464
                       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
            bZIP_1  24 KkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                       K+ e+eeL+ k+++L aeN++L++el+ + +e +kl se+e
  PSME_00041126-RA 120 KQLECEELTAKADTLNAENTTLRNELKLIAEELEKLASENE 160
                       899***********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MPPQYLGLSR GLSLQRGITP RTTQLQVVEL LLNPDWLARG LSAGLKVLGT NLATGNWKIQ  60
AESVVTVSFP ALQVGFTHSP GFYIVAAGML DGRGKTVRSS KYCSIDGSLC CVVLAPTSMK  120
QLECEELTAK ADTLNAENTT LRNELKLIAE ELEKLASENE LLKDWKLSLA LPVVASVVAV  180
RVLDLGSVVV ARWSTSTPPS TSTSTSAFLN HDNFWHIQQH YAIIIST
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-