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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pahal.A00247.4 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
G2-like |
| Protein Properties |
Length: 322aa MW: 34998.9 Da PI: 6.8977 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.A00247.4 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 97.3 | 1.1e-30 | 249 | 300 | 1 | 52 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52
kprlrWt eLHerFveav++LGG+ekAtPk +l+lmkv+gLt++hvkSHLQ
Pahal.A00247.4 249 KPRLRWTLELHERFVEAVNKLGGPEKATPKGVLKLMKVEGLTIYHVKSHLQS 300
79*************************************************5 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MDHTCTAPQP SAHSLFRAKS DHCGSAHDPQ SSCASAQSSS VKSEMVGSLS LTKILPLDLH 60
KRSPESNPER SASRASQAQL SDPISSSSST FCTSMFSLKT SSGSCRQKGA LPFLPHPPKC 120
EEQQQQISAR QPSSSSSLLF GADLSNGGHD DAEHSGDLKD FLNLSGDVSE GSFPGESNSM 180
AFSEQMEFQF LSEQLGIAIT NNEESPRLDD IYDRPPQTSS SYSDQENLQS AASLVKVQLS 240
SSRAEVCNKP RLRWTLELHE RFVEAVNKLG GPEKATPKGV LKLMKVEGLT IYHVKSHLQS 300
LLLSRNAEIS FRQISSRDKR R*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 1e-23 | 249 | 305 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 1e-23 | 249 | 305 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 1e-23 | 249 | 305 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-23 | 249 | 305 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-23 | 249 | 305 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-23 | 249 | 305 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 1e-23 | 249 | 305 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 1e-23 | 249 | 305 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 1e-23 | 249 | 305 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 1e-23 | 249 | 305 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 1e-23 | 249 | 305 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 1e-23 | 249 | 305 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR1 and PHR2 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q6YXZ4}. |
| UniProt | Transcription factor involved in phosphate starvation signaling (PubMed:26082401). Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes (PubMed:26082401). Functionally redundant with PHR1 and PHR2 in regulating Pi starvation response and Pi homeostasis (PubMed:26082401). {ECO:0000269|PubMed:26082401}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated under Pi starvation conditions. {ECO:0000269|PubMed:26082401}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT038317 | 4e-67 | BT038317.1 Zea mays full-length cDNA clone ZM_BFb0227D23 mRNA, complete cds. |
| GenBank | EU954590 | 4e-67 | EU954590.1 Zea mays clone 1472551 hypothetical protein mRNA, complete cds. |
| GenBank | JX469978 | 4e-67 | JX469978.1 Zea mays subsp. mays clone UT3338 G2-like transcription factor mRNA, partial cds. |
