PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pahal.B01367.1
Organism
Panicum hallii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
Family EIL
Protein Properties Length: 321aa    MW: 32839.9 Da    PI: 8.3968
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pahal.B01367.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN363.17.9e-2083183135230
                     -STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--......-----GGG--HHHHHHHHHHHHHHTGGGHHHH CS
            EIN3 135 slselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqg.....tppykkphdlkkawkvsvLtavikhmsptieei 224
                      l +l +  lgS+Lsalm +cdpp  +    +  +pPWWPt +e+ww    +++        + p+     lkka kv+vL a +kh sp+++++
  Pahal.B01367.1  83 ALDKLKNDALGSMLSALMPACDPPVEQRLGWARPPPPWWPTASEDWWVPEMVAHLFTmpahtPVPFAPAYKLKKAQKVAVLVAIVKHHSPDLDRM 177
                     577788889***************99999999999************96655554444556678999999************************9 PP

                     HHTTTT CS
            EIN3 225 relerq 230
                        ++ 
  Pahal.B01367.1 178 SSKAMC 183
                     876543 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.107.5E-3278207IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048731.7E-1981184No hitNo description
SuperFamilySSF1167689.81E-2982206IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MAMAFPVAGV NGAALRWSTA ATLVAASRAA ALPLPAMTSV SAGPAPPPFV LAPPVPLQVI  60
GYGAMAGAIA PPAPAFGMPL TAALDKLKND ALGSMLSALM PACDPPVEQR LGWARPPPPW  120
WPTASEDWWV PEMVAHLFTM PAHTPVPFAP AYKLKKAQKV AVLVAIVKHH SPDLDRMSSK  180
AMCDKANLTV PEANLWKSAL WNEAARCKVN LSVPRPPAVF NFVLLQPPHG DGHCQAASCA  240
TATTENAVRG GGGIAAATDG GCEHGANLVG ASVAAPAAGV GQVVAAAEPE QRQEQHSDGV  300
VHGGVVATDG GRRARPASRP *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A8e-178320511130ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2T8KNG80.0A0A2T8KNG8_9POAL; Uncharacterized protein
STRINGSi033190m1e-102(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15037818