PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pahal.B01368.1
Organism
Panicum hallii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
Family EIL
Protein Properties Length: 465aa    MW: 48477.3 Da    PI: 7.2238
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pahal.B01368.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN353.38e-17172287143257
                     HHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--......-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSS CS
            EIN3 143 tlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqg.....tppykkphdlkkawkvsvLtavikhmsptieeirelerqsk 232
                     +  SLL alm +c pp +  +  +g +pPWWPt + +ww    +++        + p+     lkka kv+vL av+kh+ p++++i        
  Pahal.B01368.1 172 DQRSLLWALMPACLPPLQPGQGMAGAPPPWWPTASVDWWVPELVAHLATmplhtQVPFVPLYRLKKAQKVAVLVAVVKHLTPDFTRIL----SEA 262
                     344*******************************99999743333322234555678889999*********************9984....445 PP

                     SSTTT--SHHHHHHHHHHTTTTT-S CS
            EIN3 233 ylqdkmsakesfallsvlnqeekec 257
                     +l+ k s  e   + s l +e ++c
  Pahal.B01368.1 263 SLKAKLSVCENILWNSALVSEWAKC 287
                     5666666666666666666665555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.104.1E-23174285IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.75E-21175284IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048737.4E-13175261No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MAGQSSNLGA SSSMRKKEGK RKESATRAEK AKKPNVTARL SGSSVPVVPS NRPTSHAMVV  60
AFPMAGVNGA ALLWSTAAAL GAASGAAALA LPAATGANGP AATATAPGAA SIVTAAAAPP  120
ASRFDNGVTV PLELLRAAGG RDVPLPIRRI TQRRRRAGAG RWHTARGGPG QDQRSLLWAL  180
MPACLPPLQP GQGMAGAPPP WWPTASVDWW VPELVAHLAT MPLHTQVPFV PLYRLKKAQK  240
VAVLVAVVKH LTPDFTRILS EASLKAKLSV CENILWNSAL VSEWAKCLRP RFVVHGDDDG  300
HRQARSSTTS SAIVVHGGVA AADGCEQVAN ILPGNSVTTP ADDTGQVVTA AEPEQHGDGV  360
LHGASLLLLM LWLPVTEPEQ HGDKLAIDVA EAELKQQFED MLASPLQLQQ GEEVHQVVDA  420
EIPGADAAIG DEQISSISPD FDVPMATPKE VSGPYYHVVD HAAP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A1e-1117528322128ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A3L6QVA80.0A0A3L6QVA8_PANMI; Uncharacterized protein
STRINGSi033190m4e-62(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15037818