PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pahal.D00806.1
Organism
Panicum hallii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
Family bZIP
Protein Properties Length: 176aa    MW: 18517.3 Da    PI: 11.4462
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pahal.D00806.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.28.4e-0975124554
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                     +r+rr ++NRe+Arr R+R++ +++ L  +v+eL a N +L+ el++   
  Pahal.D00806.1  75 RRARRQASNRESARRARARRRGQLDVLSSRVAELRAANARLAVELNRVAA 124
                     79*******************************************99765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.1E-470135IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.4E-771120No hitNo description
PfamPF077161.8E-472120IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.38173122IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-675119No hitNo description
PROSITE patternPS0003607893IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MQRDIGTLAR HPLGAAEFSS LYLLQHGSGS GGAAGGGANG PWWSYSCHGG SSGASPGELE  60
LQAAGAAAAA RDDERRARRQ ASNRESARRA RARRRGQLDV LSSRVAELRA ANARLAVELN  120
RVAAARARAA REGPRRREVA RALRERLDTA EAQHAAAARE KETGDEEAGT PTETN*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004967159.23e-30bZIP transcription factor 44-like
TrEMBLA0A2T7DWA11e-111A0A2T7DWA1_9POAL; Uncharacterized protein
TrEMBLA0A2T8JC571e-111A0A2T8JC57_9POAL; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP127422735